opendvp.tl.scimap_spatial_cluster

scimap_spatial_cluster(adata, method='kmeans', layer='log', subset_genes=None, sub_cluster=False, sub_cluster_column='phenotype', sub_cluster_group=None, k=10, n_pcs=None, resolution=1, phenograph_clustering_metric='euclidean', nearest_neighbors=30, use_raw=True, log=True, random_state=0, collapse_labels=False, label=None, verbose=True, output_dir=None)