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opendvp
API Reference
Datasets
opendvp.datasets.tutorial_data
Input / Output
opendvp.io.adata_to_qupath
opendvp.io.adata_to_voronoi
opendvp.io.import_thresholds
opendvp.io.quant_to_adata
opendvp.io.segmask_to_qupath
opendvp.io.DIANN_to_adata
opendvp.io.import_perseus
opendvp.io.export_adata
opendvp.io.export_figure
Metrics
opendvp.metrics.coefficient_of_variation
opendvp.metrics.nan_difference
Plotting
opendvp.pl.plot_graph_network
opendvp.pl.stacked_barplot
opendvp.pl.abundance_histograms
opendvp.pl.correlation_heatmap
opendvp.pl.coefficient_of_variation
opendvp.pl.density
opendvp.pl.dual_axis_boxplots
opendvp.pl.feature_comparison_boxplot
opendvp.pl.imputation_qc
opendvp.pl.pca_loadings
opendvp.pl.rankplot
opendvp.pl.upset
opendvp.pl.volcano
Preprocessing
opendvp.pp.impute_marker_with_annotation
opendvp.pp.scimap_rescale
Tools
opendvp.tl.filter_by_abs_value
opendvp.tl.filter_by_annotation
opendvp.tl.filter_by_ratio
opendvp.tl.filter_features_byNaNs
opendvp.tl.impute_gaussian
opendvp.tl.spatial_autocorrelation
opendvp.tl.spatial_hyperparameter_search
opendvp.tl.stats_anova
opendvp.tl.stats_average_samples
opendvp.tl.stats_bootstrap
opendvp.tl.stats_ttest
opendvp.tl.scimap_phenotype
opendvp.tl.scimap_spatial_cluster
opendvp.tl.scimap_spatial_lda
Utils
opendvp.utils.get_datetime
opendvp.utils.parse_color_for_qupath
Imaging
opendvp.imaging.mask_to_polygons
Tutorials
T1: Image single-cell analysis
T2: Downstream Proteomics
T3: Proteomics Integration
openDVP the framework
Experimental
Imaging
Tissue and Slides
Computational
Install opendvp
Getting started with MCMICRO
Getting started with SOPA
Contribution Guide
.rst
.pdf
opendvp.utils.get_datetime
Contents
get_datetime()
opendvp.utils.get_datetime
#
get_datetime
(
)
#
get_datetime.
Contents
get_datetime()